BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038G09LP1|AL430601
(925 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig921 1732 0.0
>3x_Contig921
Length = 3599
Score = 1732 bits (871), Expect = 0.0
Identities = 920/931 (98%), Gaps = 6/931 (0%)
Strand = Plus / Plus
Query: 1 gatctagaaaagtagttaacagttaacttatttcgattttaatatgccagtytgtatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 286 gatctagaaaagtagttaacagttaacttatttcgattttaatatgccagtctgtatttt 345
Query: 61 ccaaaaacctttgggtttttttccttctgtttgaaacactatacgtattcaatacggcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ccaaaaacctttgggtttttttccttctgtttgaaacactatacgtattcaatacggcag 405
Query: 121 agcttagaagaacaaatagaagagaaagaccaaaaaaaaaaaagatatttatacgtcacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 agcttagaagaacaaatagaagagaaagaccaaaaaaaaaaaagatatttatacgtcacg 465
Query: 181 tgctcgtaatatatcacatgaccttgaattttctgtttcgatttggtcgatcatctcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tgctcgtaatatatcacatgaccttgaattttctgtttcgatttggtcgatcatctcttt 525
Query: 241 ctactaaactgaagaataaaattaaaaaaaaaaatgctaaaaacctagaaataatcaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ctactaaactgaagaataaaattaaaaaaaaaaatgctaaaaacctagaaataatcaaaa 585
Query: 301 aatgtgctagtctcattggtaattgagatgggaatagagattgawagatgaggctcaccg 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 586 aatgtgctagtctcattggtaattgagatgggaatagagattgaaagatgaggctcaccg 645
Query: 361 ggttaaccgatttggttgagaaaagtcttgtgatatagcgttactagagtgatgcaagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ggttaaccgatttggttgagaaaagtcttgtgatatagcgttactagagtgatgcaagtt 705
Query: 421 agtggttttggtaacgtgaattagattggtgctttggcacagcaaaaccaattggataac 480
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 706 agtggttttggtaacgtgaatcagattggtgctttggcacagcaaaaccaattggataac 765
Query: 481 ttagtcagcgtta-sattcgtggatggactaacgctactcaacaggatttgttgaatttc 539
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ttagtcagcgttagcattcgtggatggactaacgctactcaacaggatttgttgaatttc 825
Query: 540 atttcgagaaagaccaggatctcagtgagaaactctgtggttcaaggggacactatagtt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 atttcgagaaagaccaggatctcagtgagaaactctgtggttcaaggggacactatagtt 885
Query: 600 ggttatgtgacaccgca-gaggcagatcaattggtgaaatttagtgggta-cggtttgca 657
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 886 ggttatgtgacaccgcaggaggcagatcaattggtgaaatttagtgggtaccggtttgca 945
Query: 658 ggcaattcattgaagattcacaaggcagccggtgggaacacaaaccctaatacgaatgat 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 ggcaattcattgaagattcacaaggcagccggtgggaacacaaaccctaatacgaatgat 1005
Query: 718 acgataaccgttcttcgtaatgtgcttttgagaagatataatgtgc-aacgaggatgttg 776
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1006 acgataaccgttcttcgtaatgtgcttttgagaagatataatgtgcaaacgaggatgttg 1065
Query: 777 gatcttggtaatttgttcaatgatccggagttggtgc-amgcggtatggctccgaaaaat 835
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 1066 gatcttggtaatttgttcaatgatccggagttggtgcaacgcggtatggctccgaaaaat 1125
Query: 836 gttaatacgca-tccaagatgttcccggctatgatgaaagtggcttcaaaggagcctagc 894
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1126 gttaatacgcagtccaagatgttcccggctatgatgaaagtggcttcaaaggagcctagc 1185
Query: 895 atggttgttgaatcgatcaacctatctgata 925
|||||||||||||||||||||||||||||||
Sbjct: 1186 atggttgttgaatcgatcaacctatctgata 1216
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,896
Number of Sequences: 1807
Number of extensions: 18896
Number of successful extensions: 197
Number of sequences better than 1.0e-20: 1
length of query: 925
length of database: 10,358,551
effective HSP length: 16
effective length of query: 909
effective length of database: 10,329,639
effective search space: 9389641851
effective search space used: 9389641851
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)